| Thursday 9th July 2009 | |||
| First Qualifying Round 2nd Leg | |||
| B36 Torshavn | 0-2 | Olimpi Rustavi | (0-4) |
| Birkirkara | 0-0 | NK Slaven Koprivnica | (0-1) |
| Bnei Yehuda | 3-0 | Simurq | (4-0) |
| Dinamo Tirana | 2-0 | FC Lahti | (3-4) |
| FK Vetra | 3-0 | Grevenmacher | (6-0) |
| Inter Baku | 1-3 | Spartak Trnava | (2-5) |
| Irtysh Pavlodar | 2-1 | Szombathelyi Haladas | (2-2) |
| (Szombathelyi Haladas won on away goals) | |||
| Keflavik | 2-2 | Valletta | (2-5) |
| Linfield | 0-3 | Randers | (0-7) |
| Llanelli | 0-3 | Motherwell | (1-3) |
| Mika Ashtarak | 1-1 | Helsingborgs | (2-4) |
| MTZ-RIPO Minsk | 2-1 | Sutjeska Niksic | aet (3-2) |
| NK Rudar Velenje | 3-1 | Trans Narva | (6-1) |
| NK Siroki Brijeg | 0-1 | Banants Yerevan | (2-1) |
| Nomme Kalju | 0-0 | Dinaburg | (1-2) |
| Okzhetpes Kokshetau | 0-2 | Zimbru Chisinau | (2-3) |
| Polonia Warsaw | 0-1 | Buducnost Podgorica | (2-1) |
| Renova | 1-1 | Dinamo Minsk | (2-3) |
| Rosenborg | 3-1 | NSI Runavik | (6-1) |
| The New Saints | 1-2 | Fram Reykjavik | (2-4) |
| UN Kaerjeng 97 | 1-2 | Anorthosis Famagusta | (1-7) |
| Vllaznia Shkoder | 1-1 | Sligo Rovers | (3-2) |
| Zestafoni | 6-0 | Lisburn Distillery | (11-1) |
July 2009
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